CDS
| Accession Number | TCMCG031C10350 |
| gbkey | CDS |
| Protein Id | XP_019441245.1 |
| Location | join(22202255..22202266,22202361..22202477,22202572..22202630,22202791..22202850,22202963..22203016,22203146..22203194,22203297..22203344,22203437..22203502,22203574..22203624,22203915..22204034,22204107..22204191,22204289..22204370,22204811..22204925,22205063..22205119,22205225..22205271,22205369..22205423,22207826..22207903) |
| Gene | LOC109346245 |
| GeneID | 109346245 |
| Organism | Lupinus angustifolius |
Protein
| Length | 384aa |
| Molecule type | protein |
| Topology | linear |
| Data_file_division | PLN |
| dblink | BioProject:PRJNA356456 |
| db_source | XM_019585700.1 |
| Definition | PREDICTED: flap endonuclease 1 isoform X2 [Lupinus angustifolius] |
EGGNOG-MAPPER Annotation
| COG_category | L |
| Description | Structure-specific nuclease with 5'-flap endonuclease and 5'-3' exonuclease activities involved in DNA replication and repair. During DNA replication, cleaves the 5'-overhanging flap structure that is generated by displacement synthesis when DNA polymerase encounters the 5'-end of a downstream Okazaki fragment. It enters the flap from the 5'-end and then tracks to cleave the flap base, leaving a nick for ligation. Also involved in the long patch base excision repair (LP-BER) pathway, by cleaving within the apurinic apyrimidinic (AP) site-terminated flap. Acts as a genome stabilization factor that prevents flaps from equilibrating into structurs that lead to duplications and deletions. Also possesses 5'-3' exonuclease activity on nicked or gapped double- stranded DNA, and exhibits RNase H activity. Also involved in replication and repair of rDNA and in repairing mitochondrial DNA |
| KEGG_TC | - |
| KEGG_Module | - |
| KEGG_Reaction | - |
| KEGG_rclass | - |
| BRITE |
ko00000
[VIEW IN KEGG] ko00001 [VIEW IN KEGG] ko01000 [VIEW IN KEGG] ko03032 [VIEW IN KEGG] ko03400 [VIEW IN KEGG] ko04147 [VIEW IN KEGG] |
| KEGG_ko |
ko:K04799
[VIEW IN KEGG] |
| EC | - |
| KEGG_Pathway |
ko03030
[VIEW IN KEGG] ko03410 [VIEW IN KEGG] ko03450 [VIEW IN KEGG] map03030 [VIEW IN KEGG] map03410 [VIEW IN KEGG] map03450 [VIEW IN KEGG] |
| GOs | - |
Sequence
| CDS: ATGGGTATTAAGGGTTTAACGAAGCTTTTGGCTGACAATGCCCCAAAATCAATGAAGGAGAACAAATTTGAGAGCTATTTTGGCCGAAAGATCGCCATTGACGCTAGCATGAGCATTTATCAGTTTCTTATTGTAGTGGGAAGAATTGGAACTGAGACTCTCACTAATGAAGCTGGTGAAGTTACTAGTCATTTGCAAGGGATGTTTTCACGCACAATCAGACTTCTAGAAGCTGGGATCAAGCCAGTATATGTTTTTGATGGTAAGCCACCCGATTTGAAGAAGCAAGAGTTGGCAAAACGTTACTCAAAGAGGGCTGAGGCTACTGAGGGTTTGACAGAAGCCATAGAGGCTGACAATAAGGAAGACATTGAGAAATTCAGTAAACGGACAGTGAAGGTTACAAAACAGCATAATGATGACTGCAAAAGACTTCTAAGACTCATGGGAGTGCCTGTTGTTGAGGCACCCTCAGAAGCAGAGGCACAGTGCGCTGCACTCTGCAAAGCTGGAAAGGTTTATGCTGTGGCTTCTGAAGACATGGATTCCTTAACATTTGGAGCTAAAAAATTTCTTCGCCACTTAATGGATCCTAGCTCGAAAAAAGTTCCAGTGATGGAATTTGAAATTGAAAAGATTTTGGAGGGGCTAAATATGACCATGGACCAATTTATCGACTTGTGCATTCTTTCTGGATGTGACTATTGTGAAAGCATTCGAGGGATTGGAGGAATTTCGGCCTTGAAGCTCATACGTCAGCATGGCTCTATCGAGAATATACTGGAGAACATAAATAAAGAGAGGTACCAGATACCAGATGATTGGCCATATCAAGAGGCTCGGCGCCTTTTTAAAGAACCAACAGTCTTGATTGAAGAAGAGGAACTTAATCTTAAGTGGTCTGCTCCAGATGAAGAAGGGTTAATATCATTTCTGGTAAATGAGAATGGATTCAACAATGACAGGGTGACAAAGGCAATAGAAAAAATTAAAGCAGCAAAGAACAAGTCATCACAGGGCCGATTGGAATCATTTTTTAAGCCGACTGCAAATCCATCTGTACCTATCAAACGGAAGGAAACACCAGAGAATAATGCTAAAGAGACTAACAAAAACAAAAAGACCAAGGGCAGTGGTGGTAGGAAGAAGAAATAG |
| Protein: MGIKGLTKLLADNAPKSMKENKFESYFGRKIAIDASMSIYQFLIVVGRIGTETLTNEAGEVTSHLQGMFSRTIRLLEAGIKPVYVFDGKPPDLKKQELAKRYSKRAEATEGLTEAIEADNKEDIEKFSKRTVKVTKQHNDDCKRLLRLMGVPVVEAPSEAEAQCAALCKAGKVYAVASEDMDSLTFGAKKFLRHLMDPSSKKVPVMEFEIEKILEGLNMTMDQFIDLCILSGCDYCESIRGIGGISALKLIRQHGSIENILENINKERYQIPDDWPYQEARRLFKEPTVLIEEEELNLKWSAPDEEGLISFLVNENGFNNDRVTKAIEKIKAAKNKSSQGRLESFFKPTANPSVPIKRKETPENNAKETNKNKKTKGSGGRKKK |